Table 3.
Details of GWAS-identified and animal model-verified significant markers from the backcross chicken response to E. maxima primary infection.
| Trait | Marker | Location Chr:mb | GA (P-value) |
|---|---|---|---|
| PR | Affx-51275363 | 3:49284591 | -0.66 (<0.001) |
| LS | Affx-51243371 | 3:31960902 | 0.67 (<0.001) |
| Affx-50321421 | 1:20945328 | 0.73 (<0.001) | |
| Affx-50226161 | 1:150098597 | 0.57 (<0.001) | |
| Affx-51010702 | 2:98848476 | 0.54 (<0.001) | |
| IL-10 | Affx-50999702 | 2:92008902 | -1.49 (<0.001) |
| Affx-50194384 | 1:132582437 | -1.36 (<0.001) | |
| Affx-51587399 | 5:47737604 | -1.76 (<0.001) | |
| Affx-50857122 | 2:136484786 | 1.42 (0.002) |
Measured traits – parasite replication per host genome (PR), Lesion Score (LS), and serum interleukin-10 (IL-10). Details provided: Affymetrix marker identifier; chromosome and position of markers in the Gal-gal5 assembly (Chr:mb); the additive genetic effect (GA) and significance values (P-value).