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. 2018 Sep 25;35(12):2886–2899. doi: 10.1093/molbev/msy183

Fig. 3.

Fig. 3.

Expression of BRAF and BRAFP1 in primates and mouse. (A–D) BRAFP1 fragments per kilobase per million mapped reads (FPKM) levels are plotted against BRAF FPKM on a per sample basis. Number of samples for each species is indicated. The key (right) indicates the tissue/cell type for each sample. See Materials and Methods for RNA-seq data sources. (E) BRAFP1 TPM against BRAF TPM levels are shown for each sample available from GTEx where BRAFP1 expression is ≥0.1 TPM (n = 1,701). Samples all originate from somatic tissues. P-value is calculated by Spearman rank-order correlation test. (F) The percentage of GTEx samples in each tissue where BRAFP1 expression is ≥0.1 TPM with ≥6 reads aligning to the pseudogene is shown. The green line at 20% indicates the threshold for expression according to GTEx criteria. The total numbers of samples from each tissue are indicated.