Table 1.
Metatranscriptome sequence statistics.
| Sample name | Read | Contig | ||||
|---|---|---|---|---|---|---|
| Number of PE reads (M) | Average length (bp) | Total bases (Mb) | % of reads assembled in contig | Number of contig | Average length (bp) | |
| MS151_library 1 | 4.8 | 145 | 690.5 | 98.4 | 7,253 | 207 |
| MS151_library 2 | 4.8 | 143 | 690.2 | 98.2 | 7,517 | 209 |
| MS151_library 3 | 5.4 | 143 | 765.2 | 98.4 | 8,291 | 202 |
| MS151_library 4 | 4.5 | 143 | 649.9 | 98.4 | 7,364 | 209 |
| MS151_library 5 | 4.8 | 144 | 686.8 | 98.0 | 7,072 | 212 |
| MS151_library 6 | 4.3 | 145 | 625.0 | 98.0 | 6,183 | 213 |
| MS151_library 7 | 4.9 | 143 | 696.9 | 98.4 | 7,635 | 204 |
| MS151_library 8 | 3.6 | 147 | 525.9 | 97.3 | 5,889 | 222 |
| MS151_library 9 | 4.9 | 146 | 707.4 | 97.9 | 7,875 | 208 |
| MS151_library 10 | 4.5 | 145 | 653.9 | 98.4 | 6,779 | 215 |
| MS151_library 11 | 4.8 | 145 | 698.7 | 98.1 | 7,117 | 211 |
| MS151_library 12 | 5.3 | 145 | 768.9 | 98.0 | 8,249 | 212 |
|
| ||||||
| HS100 | 50.4 | 100 | 5,039.2 | 98.6 | 11,713 | 203 |
| MS151 (Lib-all) | 56.5 | 144 | 8,159.3 | 99.3 | 56,491 | 208 |
| MS301 | 32.7 | 178 | 5,837.7 | 98.3 | 108,905 | 314 |
| HS100+MS151+MS301 | 139.6 | 136 | 19,036.1 | 99.1 | 216,712 | 268 |
HS100: HiSeq 2000 - 100 PE; MS151: MiSeq - 151 PE; MS151: MiSeq - 301 PE; M: million; bp; basepair; Mb: mega bases; PE: paired-end sequencing.