Table 1. Applied primer (A) and probe (B) sequences were used to analyze the PCR bias and amplification efficiency, and identify rare amounts of methylated DNA at a high background of unmethylated wild-type DNA.
A | |||
---|---|---|---|
Target | Forward (5′->3′) | Reverse (5′->3′) | Amplicon length |
PLA2R1 | GGGGTAAGGAAGGTGGAGAT | ACAAACCACCTAAATTCTAATAAACAC | 168 bp |
PLA2R1 | GGGGTAAGGAAGGTGGAGAT | ACCTAAATTCTAATAAACACCGC | 161 bp |
PLA2R1 | GGGGTAAGGAAGGTGGAGAT | AATAAACACCGCGAATTTACAAC | 150 bp |
PLA2R1 | GGAAGGTGGAGATTACGG | GCGAATTTACAACGAACAAC | 133 bp |
B | |||
Target | methylated (5′->3′) | unmethylated (5′->3′) | |
PLA2R1 | CCCAACTACTCCGCGACGCAA | AACCCAACTACTCCACAACACAAA |