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. 2018 Dec 5;8:17657. doi: 10.1038/s41598-018-36187-5

Table 2.

List of genes encoding disease resistance related proteins in the Rcr7 C-genome target region and homologous regions in A-genome of Brassica rapa.

B. oleracea Gene length (bp) No. of SNP No. of Indel RPKM in R bulks RPKM in S bulks B. rapa homologb
Bo7g108760 2724 4 1 2.420 2.433 Bra019305; A03; 25101681 to 25104380
Bo7g108830 1032 0 0 0.003 0.003 Bra013698; A01; 7228683 to 7231760
Bo7g108840 414 0 0 0.003 0.003 Bra001161; A03; 15045523 to 15048954
Bo7g108850 789 0 0 0.003 0.003 Bra027889; A09; 10044020 to 10045004
Bo7g108870 900 0 0 0.079 0.178 Bra019297; A03; 25153454 to 25154701
Bo7g109000 564 0 0 5.811 3.577 Bra019277; A03; 25319404 to 25319967
Bo7g109070 3009 0 0 0.237 0.160 Bra019273; A03; 25345715 to 25352019

aEach of these genes were in the TIR-NBS-LRR class, based in gene sequence blasts at http://www.arabidopsis.org/wublast/index2.jsp.

bGene sequence was blasted at http://brassicadb.org/brad/blastPage.php.