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Distribution of prophages. Distribution of prophages for which more than 10 related examples were found scored “intact” by PHASTER, with a cutoff of 50% of CDSs assigned to the indicated phage type used for phage assignment. Color indicates the percentage of CDSs within the phage region that matches the indicated phage on a linear scale from red at 50% to green at 100%. The phylogeny at the top uses the same colors as Fig. 1 for the different clades.
