(A) Measurements of HIV DNA were performed on CD32
pull-downs with antibody-conjugated magnetic beads and compared to cell number
normalized pre-immunoprecipitation (pre-IP) pull-downs (n = 7)
on fresh cells. (B) HIV DNA load was measured from CD32+
resting CD4+ T cells and CD32− resting
CD4+ T cells isolated using magnetic beads (n =
6). (C) FACS was performed to isolate total CD4+ T
cells, CD32+ CD4+ T cells, CD32−
CD4+ T cells, CD32− resting CD4+ T
cells (HLA-DR− CD69−
CD25−), CD32+ resting CD4+ T cells,
CD32− activated CD4+ T cells
(HLA-DR+ or CD69+ or CD25+), and
CD32+ activated CD4+ T cells from freshly isolated
PBMCs from HIV+ ART-suppressed individuals, and HIV DNA load was
measured in all sorted populations (n = 10). Each patient is
represented by a different symbol. Lines represent median. (D and
E) Contribution of each cell population to the total pool of
HIV DNA in CD4+ T cells calculated in 10 HIV+
ART-suppressed individuals. HIV total DNA copy number was determined in sorted
subsets by qPCR. Each symbol represents a different individual. The contribution
of each subset to the total pool of HIV DNA in CD4+ T cells was
calculated by accounting for the frequency of these subsets within the
CD4+ compartment and abundance of HIV DNA determined in each
subset. Horizontal lines indicate median values. All statistical comparisons
were performed using two-tailed Wilcoxon rank tests. *P
< 0.05 and **P < 0.01.