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. 2017 Apr 27;30(6):455–465. doi: 10.1093/protein/gzx018

Fig. 2.

Fig. 2

Computational pipeline for data collection and processing. (A) Seven receptors (wild-type Ste2, lower promiscuity HF10, and higher promiscuity Prom6, Prom7, Prom3, Mut1 and TBBI2) were selected. Each of the 55 peptides was converted to vectors using the eight-property VHSE system for a predictor (X) matrix of 104 features. Each receptor was characterized against the peptide library to obtain a dose response curve. Three metrics (EC50, EC10 and response at 10 μM peptide) were obtained from each curve, and further expanded using inverse/logarithm manipulations to obtain the response (Y) matrix. (B) Example grouping schemes for a representative system in which peptides are four residues long and each peptide has three properties (note that our system has 13-residue long peptides with eight properties).