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. 2018 Jan 19;46(7):e41. doi: 10.1093/nar/gky019

Table 1. Oligonucleotides sequence and their molar extinction coefficients used in this study.

ID Name Sequencea ϵ (M−1cm−1) 260 nmb Bufferc
1 AT Duplex 5′-ATA TAT ATC CCC ATA TAT AT-3′ 205700 A
2 GC Duplex 5′-GCG CGC GCT TTT GCG CGC GC-3′ 166300 A
3 A/T Duplex 5′-AAA AAA AAC CCC TTT TTT TT-3′ 191300 A
4 H-Tel Duplex 5′-GGG TTA GGG TTT TCC CTA ACC C-3′ 202200 A
5 AT Triplex 5′-AAA AAA AAC CCC TTT TTT TTC CCC TTT TTT TT-3′ 284900 C
6 GC Triplex 5′-CCC CCC CCT TTT GGG GGG GGT TTT CCC CCC CC-3′ 261600 B
7 H-Tel i-Motif 5′-CCC TAA CCC TAA CCC TAA CCC T-3′ 193700 B
8 H-Tel Quadruplex 5′-AGG GTT AGG GTT AGG GTT AGG G-3′ 228500 A
9 c-Myc Quadruplex 5′-TGA GGG TGG GTA GGG TGG GTA A-3′ 228700 A
10 c-Myc i-Motif 5′-TTC CCC ACC CTC CCC ACC CTC CCC TAA-3′ 222200 B
11 A/U RNA duplex 5′-rArArA rArArA rArArC rCrCrC rUrUrU rUrUrU rUrU-3′ 202900 C
12 DNA-RNA duplex 5′-GGG TTA GGG TTT TrCrC rCrUrA rArCrC rC-3′ 202900 A

aThe strand orientation is 5′ to 3′ from left to right, and ‘r’ denotes a ribonucleotide.

bMolar nearest neighbor extinction coefficients of the single-strand at 260 nm.

cBuffer conditions: A = 6 mM K2HPO4, 4 mM KH2PO4, 15 mM KCl, pH 7. 2; B = 1 mM K2HPO4, 9 mM KH2PO4, 15 mM KCl, pH 6.2; C = 6 mM K2HPO4, 4 mM KH2PO4, 15 mM KCl, 1 mM MgCl2, pH 7. 2.