Table 2.
Reference strains and genome sizes.
| Reference strains | Target bacterial group(s) | NCBI reference sequence | Genome size, Mbp |
|---|---|---|---|
| Escherichia coli ATCC 25922 | Escherichia sp. & domain bacteria | NZ_CP009072.1 | 5.13 |
| Bacteroides vulgatus ATCC 8482 | Bacteroides spp. | NC_009614.1 | 5.16 |
| Lactobacillus acidophilus ATCC 314 | Lactobacillus spp. | NC_006814.3 | 1.99 |
| Bifidobacterium animalis subsp. animalis ATCC 25527 | Bifidobacterium spp. | NC_017834.1 | 1.93 |
| Clostridium perfringens ATCC 13124 |
C. perfringens subgroup (Clostridium cluster I) |
NC_008261.1 | 3.26 |
| Clostridium leptum DSM 753 | C. leptum subgroup (Clostridium cluster IV) | NZ_ABCB00000000.2 | 3.27 |
| Clostridium clostridioforme DSM933 | C. coccoides subgroup (Clostridium cluster XIVa) | NZ_FOOJ00000000.1 | 5.47 |