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. 2018 May 1;29(3):283–291. doi: 10.5152/tjg.2018.17484

Table 3.

The frequencies of the genotypes and alleles at TLR2 SNP rs4986790 in H. pylori-infected subjects according to the CagA status of bacteria

TLR2 gene polymorphism Alleles


Groups CagA status TT CT CC Total C T p
PU CagA+ 27 (38.6%) 34 (48.6%) 9 (12.9%) 70 (100.0%) 52 (37.1%) 88 (62.9%) *0.22
CagA- 7 (23.3%) 16 (53.3%) 7 (23.3%) 30 (100.0%) 30 (50.0%) 30 (50.0%) **0.09
Total 34 (34.0%) 50 (50.0%) 16 (16.0%) 100 (100.0%) 82 (41.0%) 118 (59.0%)
AS CagA+ 24 (31.6%) 40 (52.6%) 12 (15.8%) 76 (100.0%) 64 (42.1%) 88 (57.9%) *0.03
CagA- 26 (52.6%) 15 (30.6%) 8 (16.3%) 49 (100.0%) 31 (31.6%) 67 (68.4%) **0.09
Total 50 (40.0%) 55 (44.0%) 20 (16.0%) 125 (100.0%) 95 (38.0%) 155 (62.0%)
NHS ---- 56 (44.8%) 39 (31.2%) 30 (24.0%) 125 (100.0%) 99 (39.6%) 151 (0.4%)
*, **

comparison of the genotypes and alleles distribution at SNP rs4986790 between subjects infected with CagA+ strains of H. pylori and those infected with CagA- strains of bacteria in specified group

AS: asymptomatic subjects; CagA: cytotoxin-associated gene A; NHS: non-infected healthy subjects; PU: peptic ulcer; SNP: single nucleotide polymorphism; TLR: Toll-like receptors