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. Author manuscript; available in PMC: 2019 Dec 1.
Published in final edited form as: Alcohol Clin Exp Res. 2018 Nov 11;42(12):2281–2297. doi: 10.1111/acer.13904

Table 2.

ADH and ALDH2 allele frequencies

ADH1B*2 ADH1B*3 ADH1C*1 ALDH2*2
rs1229984 rs2066702 rs1693482** rs671
Position 4:99,318,162 4:100,229,017 4:99,304,835 12:111,803,962
Genome Allele T A C A
RNA Allele A T G A
Amino acid His48 Cys370 Arg272 Lys504
Group Code Population
AFR ACB African Carribbeans in Barbados 0.010 0.193 0.891 0.005
AFR ASW Americans of African Ancestry in SW USA 0.205 0.861
AFR ESN Esan in Nigera 0.273 0.929
AFR GWD Gambian in Western Divisons in The Gambia 0.142 0.912 0.004
AFR LWK Luhya in Webuye, Kenya 0.141 0.859
AFR MSK Mende in Sierra Leone 0.088 0.906
AFR YRI Yoruba in Ibadan, Nigera 0.282 0.926
AMR CLM Colombians from Medellin, Colombia 0.074 0.755
AMR MXL Mexican Ancestry from Los Angeles USA 0.086 0.719 0.008
AMR PEL Peruvians from Lima, Peru 0.012 0.824 0.006
AMR PUR Puerto Ricans from Puerto Rico 0.063 0.635
ASN CDX Chinese Dai in Xishuangbanna, China 0.634 0.887 0.043
ASN CHB Han Chinese in Bejing, China 0.709 0.951 0.160
ASN CHS Southern Han Chinese 0.757 0.929 0.271
ASN JPT Japanese in Tokyo, Japan 0.731 0.928 0.240
ASN KHV Kinh in Ho Chi Minh City, Vietnam 0.646 0.919 0.136
EUR CEU Utah Residents (CEPH) with Northern and Western European ancestry 0.015 0.525
EUR FIN Finnish in Finland 0.490
EUR GBR British in England and Scotland 0.005 0.560
EUR IBS Iberian population in Spain 0.065 0.692
EUR TSI Toscani in Italia 0.051 0.692
SAN BEB Bengali from Bangladesh 0.017 0.820
SAN GIH Gujarati Indian from Houston, Texas 0.024 0.718
SAN ITU Indian Telugu from the UK 0.015 0.765
SAN PJL Punjabi from Lahore, Pakistan 0.042 0.672
SAN STU Sri Lankan Tamil from the UK 0.005 0.662

Allele corresponding to the variant noted is shown on the genomic reference strand and in the RNA (note that the ADH transcripts run in the opposite direction). Positions are on the GRCh38/hg38 human genome assembly. Data are from the 1000 genomes project, Phase 3 (The 1000 Genomes Project Consortium et al., 2015). Blanks are <0.001. Groups: AFR = African, AMR=American, ASN=East Asian, EUR=European, SAN=South Asian. Code: 3 letter identifier for population.

**

Frequencies are identical to the more frequently studied SNP rs698 (genome C, RNA G, Val350), except that for rs698, YRI=0.931, ITU= 0.760. For data on a wider range of populations and SNPs, see the alfred database https://alfred.med.yale.edu (Rajeevan et al., 2012).