Table 1.

MAP genotyping methods described in this review.

Genotyping method	Reference*
Randomly amplified polymorphic DNA	[21]
Amplified fragment length polymorphism	[22]
Pulsed-field gel electrophoresis	[23]
IS900-restriction fragment length polymorphisms	[14]
Mycobacterial interspersed repetitive unit-variable number tandem repeat	[24]
Multi-locus short sequence repeats	[25]
Single nucleotide polymorphisms	[26]
Whole genome sequencing	[27]

^*The first study that developed or used the respective genotyping methods for analysis of MAP isolates.