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. 2018 Dec 7;201(1):e00462-18. doi: 10.1128/JB.00462-18

TABLE 1.

Structures of diadenylate cyclases and phosphodiesterases and their domains

PDB ID Enzyme Domain(s) or mutation(s) Ligand(s) Metal ion Reference
3C1Z DisA DAC None None 5
3C23 DisA DAC 3′-dATP None 5
4YVZ DisA DAC 3′-dATP Mn2+ 50
3C1Y DisA DAC c-di-AMP None 5
4YXJ DisA DAC ApCpp None 50
4RV7 CdaA DAC ATP Mg2+ 43
2FB5 CdaS DAC None None Unpublished data a
2M1C GdpP PAS None None 82
5XSI GdpP DHH-DHHA1 None Mn2+ 107
5XSN GdpP DHH-DHHA1 c-di-AMP Mn2+ 107
5XSP GdpP DHH-DHHA1 5′-pApA Mn2+ 107
5XT3 GdpP DHH-DHHA1 c-di-GMP Mn2+ 107
5JJU DhhP DHH-DHHA1 5′-pApA and 5′-AMP Mn2+ 93
5O25 DhhP DHH-DHHA1 None Mn2+ 89
5O58 DhhP DHH-DHHA1 5′-pApG Mn2+ 89
D80N, D154N
5O70 DhhP DHH-DHHA1 5′-AMP Mn2+ 89
D80N, D154N
5O1U DhhP DHH-DHHA1 5′-AMP Mn2+ 89
5O4Z DhhP DHH-DHHA1 5′-AMP Mn2+ 89
D80N, D154N
5O7F DhhP DHH-DHHA1 5′-GMP Mn2+ 89
4S1B PgpH HD c-di-AMP Fe3+ 96
4S1C PgpH HD None Fe3+ 96
a

R. Zhang, M. Zhou, S. Ginell, J. Abdullah, F. Collart, and A. Joachimiak.