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. 2018 Oct 29;8(1):e1483303. doi: 10.1080/2162402X.2018.1483303

Table 2.

Selected SNPs significantly associated with PCa aggressiveness (GS ≥8 versus GS≤6 or D’Amico high versus low) and GS 4 + 3 = 7 risk.

        GS≥8 vs. GS≤6
GS 4 + 3 vs. GS 3 + 4
Gene SNP Location Model OR (95% CI)c P value OR (95% CI)c P value
NFATC1 rs25656 Coding, 3ʹUTRa REC 0.40 (0.19–0.85) 0.017 0.31 (0.15–0.62) 0.001
NFATC1 rs160189b Intron REC 0.44 (0.19–0.99) 0.048 0.30 (0.15–0.61) 0.001
MAP3K1 rs187899492 Intron DOM 3.76 (1.44–9.81) 0.007 2.89 (1.42–5.88) 0.003
TRAF2 rs6560652 Intron DOM 0.58 (0.36–0.91) 0.018 0.63 (0.45–0.88) 0.007
CD48
rs10489639
Intron
ADD
0.72 (0.53–0.97)
0.033
0.74 (0.59–0.94)
0.012
        D’Amico high vs. low
GS 4 + 3 vs. GS 3 + 4
Gene
SNP
Location
Model
OR (95% CI)d
P value
OR (95% CI)c
P value
NFATC1 rs25656 Coding, 3ʹUTRa REC 0.51 (0.29–0.90) 0.021 0.31 (0.15–0.62) 0.001
NFATC1 rs160189a Intron REC 0.51 (0.28–0.91) 0.024 0.30 (0.15–0.61) 0.001
RHOA rs11706370 Intron REC 0.47 (0.25–0.89) 0.021 0.55 (0.30–0.99) 0.048
CASP8 rs36039030 Intron DOM 0.30 (0.09–0.98) 0.047 0.29 (0.09–0.99) 0.048

aLocation varied depending on transcript isoforms. Most contain synonymous SNP involving Pro662/Pro649.

Minor transcript contains either nonsynonymous SNP His>Arg at codon 634 or 3ʹUTR SNP.

bSNP in high linkage disequilibrium (r2 > 0.8) with rs25656.

cModels adjusted for age, clinical T stage and PSA level at diagnosis.

dModels adjusted for age and PSA level at diagnosis.