Table 5. Gene flow and genetic differentiation indices between the three E18 clusters estimated from VP1 sequences.
Phylogroup 1 | Phylogroup 2 | Fst | Nm | Kxy | Dxy | Gst | Da |
---|---|---|---|---|---|---|---|
Red-I | Green-II | 0.51 | 0.48 | 30.6 | 0.09 | 0.029 | 0.05 |
Red-I | Blue-III | 0.63 | 0.29 | 39.7 | 0.13 | 0.024 | 0.08 |
Blue -III | Green-II | 0.39 | 0.78 | 30.2 | 0.09 | -0.006 | 0.04 |
Fst: Wright’s F-statistics, pairwise genetic distance, Nm: Gene flow and population migration among populations which is calculated as Nm = (1-Fst)/2Fst, Kxy: Average proportion of nucleotide differences between populations. Dxy: The average number of nucleotide substitutions per site between populations, Da: The number of net nucleotide substitutions per site between populations, Gst: Genetic differentiation index based on the frequency of haplotypes.