Table 1.
Status | Trait | ID | Ch | SNP | Position | Nearest gene | Allele (effect/other) | EAF | Beta | SE | p |
---|---|---|---|---|---|---|---|---|---|---|---|
Novel | Overall activity | 1 | 10 | rs564819152 | 21,820,650 | SKIDA1 | A/G | 0.679 | 0.028 | 0.005 | 4.20E-09 |
Novel | Sleep duration | 2 | 9 | rs2416963 | 128,241,414 | MAPKAP1 | C/T | 0.589 | 0.030 | 0.005 | 2.30E-10 |
Novel | Sleep duration | 3 | 7 | rs2006810 | 69,902,152 | AUTS2 | T/C | 0.604 | -0.028 | 0.005 | 3.90E-09 |
Novel | Sedentary | 4 | 5 | rs26579 | 87,985,295 | MEF2C-AS2 | G/C | 0.415 | 0.028 | 0.005 | 2.60E-09 |
Novel | Sedentary | 5 | 5 | rs25981 | 106,822,908 | EFNA5 | G/C | 0.531 | 0.028 | 0.005 | 3.00E-09 |
Novel | Sedentary | 6 | 3 | rs1858242 | 68,527,135 | LOC105377146 | A/G | 0.259 | 0.031 | 0.005 | 3.10E-09 |
Novel | Sedentary | 7 | 7 | rs34858520 | 71,723,883 | CALN1 | A/G | 0.558 | 0.028 | 0.005 | 4.20E-09 |
Known8 | Overall activity | 8 | 17 | rs2696625 | 44,326,864 | KANSL1-AS1 | A/G | 0.77 | -0.037 | 0.005 | 3.20E-12 |
Known8 | Overall activity | 9 | 18 | rs59499656 | 40,768,309 | SYT4 | A/T | 0.655 | -0.028 | 0.005 | 1.90E-09 |
Known Neale,12,18,21,23,24 | Sleep duration | 10 | 2 | rs62158170 | 114,082,175 | PAX8-AS1 | A/G | 0.783 | -0.051 | 0.006 | 5.80E-20 |
Known18,23 | Sleep duration | 11 | 2 | rs113851554 | 66,750,564 | MEIS1 | G/T | 0.943 | 0.090 | 0.010 | 3.10E-18 |
Known23 | Sleep duration | 12 | 6 | rs72828533 | 19,065,680 | LOC101928519 | A/T | 0.818 | 0.043 | 0.006 | 2.70E-13 |
Known12,24 | Sleep duration | 8 | 17 | rs7502280 | 43,670,221 | MAPK8IP1P2 | T/G | 0.867 | 0.051 | 0.008 | 8.80E-11 |
Known Neale,21,24 | Sleep duration | 13 | 19 | rs2303100 | 9,968,434 | OLFM2 | C/T | 0.447 | -0.030 | 0.005 | 1.40E-10 |
Known Neale, 23,24 | Sleep duration | 14 | 1 | rs75641275 | 98,327,133 | DPYD | A/C | 0.859 | 0.042 | 0.007 | 2.20E-10 |
Beta and SE are in standard deviation units
EAF effect allele frequency, Ch chromosome