Table 4.
Top three networks enriched with DE genes detected by IPA software.
Focus | ||||
---|---|---|---|---|
ID | Molecules in network | Score | molecules | Top functions |
1 | 26S proteasome, ACTC1, actin, AHSP, ARHGEF4, ARHGEF6, ASB10, BCR (complex), BRD8, caspase, cofilin, DMD, F actin, Hdac, HDAC9, HISTONE, histone deacetylase, Histone h3, Histone h4, Hsp70, Hsp90, Jnk, JUNB, LMO7, MYL12A, Nos, P glycoprotein, PRSS8, Raf, RHOD, RNA polymerase II, RPRM, SDR16C5, SIRT3, UCK2 | 31 | 17 | Cell Morphology, Organ Morphology, Skeletal and Muscular System Development and Function |
2 | ADRB, ANKRD1, BMP, CA9, Cdc2, Cdk, Cyclin A, ERCC5, ESRRG, Fascin, FST, GADD45, GADD45A, GADD45B, GADD45G, growth factor, JUN/JUNB/JUND, MAP3K, MYF6, NF-κB (complex), Notch, P-TEFb, Pak, PP1 protein complex group, PPP1R15A, Ppp2c, Rb, Sapk, Serine Protease, TNKS1BP1, TNNI1, TP53BP2, TRAFD1, TRIM55, USP28 | 29 | 16 | Cell Cycle, Cellular Growth and Proliferation, Cellular Development |
3 | Adaptor protein 1, ADRA1, C/ebp, CD3 group, CIDEC, CPT1, DGAT2, dynamin, ELOVL6, ERK1/2, FASN, FOSB, GOT, GPAT3, JINK1/2, N-cor, NFAT (complex), Nr1h, p70 S6k, PEPCK, Pkg, PLIN1, PRDX2, PRKAA, Rar, Rxr, SCD, SEMA4D, SH3GLB2, SHB, SYK/ZAP, TCF, THRSP, thyroid hormone receptor, TSH | 22 | 13 | Lipid Metabolism, Small Molecule Biochemistry, and Carbohydrate Metabolism |
DE genes between H and L groups in bold.