Table 1.
Human populations analyzed in this study
| Dataset | Short | Full Description | n |
|---|---|---|---|
| 1KGP African (n = 193) | MSL | Mende in Sierra Leone | 85 |
| YRI | Yoruba in Ibadan, Nigeria | 108 | |
| 1KGP East Asian (n = 504) | CDX | Chinese Dai in Xishuangbanna, China | 93 |
| CHB | Han Chinese in Bejing, China | 103 | |
| CHS | Southern Han Chinese, China | 105 | |
| JPT | Japanese in Tokyo, Japan | 104 | |
| KHV | Kinh in Ho Chi Minh City, Vietnam | 99 | |
| 1KGP European (n = 297) | CEU | Utah residents with NW European ancestry | 99 |
| IBS | Iberian populations in Spain | 107 | |
| GBR | British in England and Scotland | 91 | |
| 1KGP Admixed American (n = 347) | CLM | Colombian in Medellin, Colombia | 94 |
| MXL | Mexican Ancestry in Los Angeles, California | 64 | |
| PEL | Peruvian in Lima, Peru | 85 | |
| PUR | Puerto Rican in Puerto Rico | 104 | |
| HGDP Native American (n = 108) | KRT | Karitiana in Brazil | 24 |
| SRI | Surui in Brazil | 21 | |
| COL | Colombians in Colombia | 13 | |
| MAY | Maya in Mexico | 25 | |
| PIM | Pima in Mexico | 25 |
Populations are organized into continental groups: African, East Asian, European, and Admixed American from the 1000 Genomes Project (1KGP) and Native American from the Human Genome Diversity Project (HGDP). Short names, descriptions, and the numbers of genomes analyzed are provided for each individual population