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. 2018 Dec 11;5:180284. doi: 10.1038/sdata.2018.284

Table 1. Primers of 16 SNPs for MassARRAY identified from discovery stage.

Chr. SNP Location Gene Primer-EP Primer-F Primer-R
1 rs4658 43392250 SLC2A1 TCCAGGCCAGCAGAA ACGTTGGATGAAAGCTTCTATCCCAGGAGG ACGTTGGATGAATCCTAATGGAGCCTGACC
2 rs17730989 198362524 HSPD1 ACCATCAAGGCAAGTAG ACGTTGGATGTATGTTGCGTGAACCTGGAA ACGTTGGATGGTGACTTGTTTTAAAATCCG
3 rs2633851 4403817 SUMF1 GTGGACTGGGGAAGACT ACGTTGGATGGCCCACTATGGACTGACAAC ACGTTGGATGAGAAAAGCCCAATGTAGGTC
4 rs2231142 89052323 ABCG2 TTTAGAAGAGCTGCTGAGAACT ACGTTGGATGTGATGTTGTGATGGGCACTC ACGTTGGATGCGTCATAGTTGTTGCAAGCC
5 rs3776332 142441514 ARHGAP26 TTATGTCACATCTCATT GGTC ACGTTGGATGCCCACAAGTGGCTCAGATAA ACGTTGGATGTCCAGCACACTTTATGTCAC
6 rs28688207 32628660 HLA-DQB1 GAGGCCCTTGAGGTC ACGTTGGATGAATATTACCTGCTGGTGGAG ACGTTGGATGTGAGAGAGTGGCTGTTTGTG
6 rs462779 111695887 REV3L TTATTTTTTCATCCTTAAGTGTT ACGTTGGATGACTTAACCTCAGCACCAGAC ACGTTGGATGAATGAGAAAGGTACATCGAG
7 rs2070804 75933712 HSPB1 CCGAAACCTACACCAGTGTACCC ACGTTGGATGCAGGAGTCATCTTTGCTCAG ACGTTGGATGATGTGAGTCAGCCTGTGTCC
8 rs2977530 134215112 WISP1 CCTCTGAGTCAGCCA ACGTTGGATGAGGTGTTGGGAAAAGAGGTG ACGTTGGATGTCCCCACGCTTGTTTCAAAG
8 rs2929970 134241137 WISP1 AGGAAGATGGAGGTTTACC ACGTTGGATGGCTTCAACCTCTTCAGCTTT ACGTTGGATGTTCTGGTAGGAAGATGGAGG
8 rs2977549 134242033 WISP1 ATATTAAATGTCTCTTTTGCTAAG ACGTTGGATGCATACATATGCATTTCTTTG ACGTTGGATGCCAAAGCTACATGAAAATAG
10 rs2228528 50732280 ERCC6 CTTCAGCTCATAGTCAGTA ACGTTGGATGAGGAAGATGACGAGGTGGAG ACGTTGGATGGCAGAGGCTTCAGCTCATAG
11 rs228589 108093208 NPAT GGTCCAATAACCCTCC ACGTTGGATGCTTGTATTGGGTAAGCGCGG ACGTTGGATGTTTGGCCTCAAAGGTCCTTC
11 rs189037 108093833 ATM TCTCGCCTCCTCCCG ACGTTGGATGGCTAACGGAGAAAAGAAGCC ACGTTGGATGGTCAAAGTAGTATCAACCGC
16 rs3859104 55895249 CES5A TTCTATGTTCCAAATTCAAATAAATA ACGTTGGATGCTTCGAACGGAGAGATGAAC ACGTTGGATGCAAGTACCTCAATCCTCCTC
17 rs799917 41244936 BRCA1 AAGCGCCAGTCATTTGCTC ACGTTGGATGAAGGTTTCAAAGCGCCAGTC ACGTTGGATGAGAGTGGGCAGAGAATGTTG