Table 1.
Isolates of the M. abscessus dominant clones that have been identified by WGS.
| Subspecies | Infection type | Location of Study | Representative Strain(s) | Publication(s) |
|---|---|---|---|---|
| M. abscessus subsp. massiliense (MMAS) | CF pulmonary | Papworth Hospital, Cambridge, United Kingdom | patients 2, 8, 12, 14, 17, 19, 20, 22, 28, 29, 30 | Bryant et al., 2013 |
| CF pulmonary | Seattle, WA, United States | Index case: 2B-0107 MAB_082312_2258 MAB_091912_2446 | Aitken et al., 2012; Tettelin et al., 2014 | |
| post surgical soft tissue | Rio de Janeiro, Brazil | CRM-0020 | Duarte et al., 2009; Davidson et al., 2013a,b | |
| pediatric CF pulmonary | Great Ormond Street Hospital, London, United Kingdom | patient 7 | Harris et al., 2015 | |
| CF pulmonary | United States, United Kingdom, Ireland, Sweden, Netherlands, Denmark, Ireland and Australia | UNC666 (United States), SMRL275 (United Kingdom), DEN524 (Denmark), AUS755 (Australia), SVH899 (Ireland) | Bryant et al., 2016 | |
| post surgical soft tissue | Para, Brazil | BRA_PA_42 | Everall et al., 2017 | |
| M. abscessus subsp. abscessus (MAB) | post surgical soft tissue | Missouri, United States | type strain ATCC19977T | Moore and Frerichs, 1953; Ripoll et al., 2009 |
| CF and non-CF pulmonary | Colorado, United States | NJH1-6, NJH9-10 | Davidson et al., 2014 | |
| pediatric CF pulmonary | Great Ormond Street Hospital, London, United Kingdom | patients 3, 18, 19, 22 | Harris et al., 2015 | |
| CF pulmonary | United States, United Kingdom, Ireland, Sweden, Netherlands, Denmark, Ireland and Australia | UNC617 (United States), SMRL461 (United Kingdom), DEN541 (Denmark), AUS774 (Australia) | Bryant et al., 2016 | |
| CF pulmonary | Italy | patients CP, CR, GL, BE, GM | Tortoli et al., 2017 | |