TABLE 2.
B. anthracis strains used in this studya
| Strain | Alternative ID | Clade/MLVA-8 genotype |
Plasmid content |
Origin | Source | NCBI accession no. |
Reference |
|---|---|---|---|---|---|---|---|
| Sterne* | 34F2 | A/— | pX01+, pX02− | South Africa | Animal | CP009541.1 | 51 |
| UT308* | NA | A/— | pX01+, pX02− | Derived from strain 32 | Human | QPKP00000000 | 4 |
| 2007740878* | Ba0878, BA0018 | A/7 | pX01+, pX02+ | Canada | Unknown | NA | 52 |
| 2000031656 | Ba1656, Ames | A/62 | pX01+, pX02+ | USA (Texas) | Animal | NC_007530.2 | 53 |
| 2000031103 | Ba1103, ASC 32, strain 32 | A/53 | pX01+, pX02+ | England | Human | QPKO00000000 | 12 |
| 2007740863 | Ba0863, SK57 | A/48 | pX01+, pX02+ | England | Unknown | QPKQ00000000 | 14 |
| 2002734065 | Ba4065, SK57A | A/— | pX01−, pX02− | England | Unknown | SRR5811123 | This study |
| 2002734039 | Ba4039, SK57C | A/116 | pX01+, pX02+ | England | Unknown | SRR2340304 | 25 |
| 2002013027 | Ba3027, AO427 | A/4 | pX01+, pX02+ | Unknown | Unknown | SRR2339620 | This study |
| 2000031038 | Ba1038, 300, Dole 111 | A/71 | pX01+, pX02+ | Unknown | Environmental | SRR5811163 | 54 |
| 2002013017 | Ba3017, AO412 | A/4 | pX01+, pX02+ | Unknown | Unknown | SRR2339614 | This study |
| 2000032823 | Ba2823, A0048d | A/— | pX01−, pX02+ | Unknown | Unknown | SRR5811071 | 25 |
| 2002013011 | Ba3011, SPU A0423 | A/118 | pX01+, pX02+ | Unknown | Unknown | SRR2340484 | 25 |
| 2002013007 | Ba3007, AO461 | A/4 | pX01+, pX02+ | Unknown | Unknown | SRR2340462 | This study |
| 2000031048 | Ba1048, 305, tannery 42 | B/107 | pX01+, pX02+ | Unknown | Environmental | SRR5811217 | 25 |
| 2002734089 | Ba4089, SK83, C2291 | A/71 | pX01+, pX02+ | USA (New Jersey) | Environmental | SRR2340461 | This study |
| 2002013094 | Ba3094, 240 | C/133 | pX01+, pX02+ | Unknown | Environmental | SRR5947106 | 25 |
| 2000031021 | Ba1021, 239, LA164B | C/— | pX01−, pX02+ | USA (Louisiana) | Environmental | SRR5947105 | This study |
| 2000031052 | Ba1052, 278, #25600 | C/— | pX01−, pX02+ | USA (Wyoming) | Animal | SRR5811214 | This study |
Asterisks (*) indicate reference strains not included in the sigP-bla1 screen. ID, identifier(s); NA, not available; —, MLVA-8 genotype determination not performed due to lack of a plasmid.