Skip to main content
. 2018 Dec 12;1(6):e201800197. doi: 10.26508/lsa.201800197

Figure S13. Effect of the med14-3 mutation on DNA methylation rates.

Figure S13.

(A) TEs localized in chromosome arms or pericentromeres were aligned at their 5′-end or 3′-end, and average cytosine methylation levels in the indicated nucleotide contexts were calculated from 3 kb upstream to 3 kb downstream in WT (L5 background) and med14-3. Upstream and downstream regions were divided in 100-bp bins, whereas annotations were divided in 40 bins of equal length. (B) Average DNA methylation levels were calculated at PCGs as in (A). (C) DNA methylation levels in the CG, CHG, and CHH contexts in WT and med14-3 at med14-3 hypo-CHG differentially methylated regions (DMRs) (left) and med14-3 hypo-CHH DMRs (right).