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. 2018 Dec 12;49:121. doi: 10.1186/s13567-018-0616-9

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© The Author(s) 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Numbers of differentially expressed genes. A Summary of differentially expressed transcripts responding to Salmonella inoculation (2 dpi/d0, 7 dpi/d0, 7 dpi/2 dpi), or expression showing time effect. B Comparison of differentially expressed gene counts in LS/PS animals as reported by Huang et al. [25]. These genes were identified using the linear mixed model, and the false discovery rate (FDR) was controlled at less than 0.05, with the fold change between time points required to be higher than 1.5 or less than 0.67.