FIG 1.

Putative genes involved in the uptake and initial catabolism of glucose, galactose, mannose, fructose, xylose, and arabinose into central metabolism. The gene annotations for pathways were collected from KEGG database (37–39) and MetaCyc database (40) for P. protegens Pf-5. The corresponding gene loci for the genes in the figure are shown in Table S1 in the supplemental material. Glucn, gluconate; 2-KGlucn, 2-ketogluconate; 2-KGlucnP, 2-keto-6-phosphogluconate; G6P, glucose 6-phosphate; 6P-Glucn, 6-phosphogluconate; F6P, fructose 6-phosphate; FBP, fructose 1,6-bisphosphate; DHAP, dihydroxyacetone-3-phosphate; GAP, glyceraldehyde 3-phosphate; F1P, fructose 1-phosphate; Pyr, pyruvate; PEP, phosphoenolpyruvate.