Table 1.

Features of the minicircles cloned after RCA or identified by NGS from B. vulgaris (beet) plants infected by BCTIV

Clone	Total length (nt)	BCTIV-derived sequence (nt) [%]	Beet-derived sequence (nt)	BCTIV sequences in minicirclesa	AT % in BCTIV-derived sequence	AT % in beet-derived sequence	Locus of B. vulgaris (best BLAST hit)
RCA from field-grown samples
MC#1	1315	580 [44.1]	735	1–172 … 2435–2845	61.4	69.8	Beta chr6 9915362–9916096
MC#2	1294	416 [32.0]	878b	1–166 … 2596–2845	61.3	71.2	Beta chr7 36583873–36584676
MC#3	1502	444 [29.3]	1058	1–157 … 2223–2299 … 2637–2845	59	71.2	Beta chr3:un.sca001 135440–136484
RCA from experimental infection
MC#4	1337	459 [34.33]	878b	1–135 … 1184–1234 … 2570–2845	62.3	73.6	Beta chr6 57105781–57106674
MC#5	1504	532 [35.4]	972b	1–267 … 2581–2845	62	70.6	Beta chr3.sca001 1755016–1755723
MC#6	1572	574 [36.5]	998	1–188 … 2460–2845	61.5	68.2	Beta chr5.sca008 17697504–17698497
MC#7	1484	664 [44.7]	820	1–327 … 2509–2845	61.1	71.2	Beta chr1.sca002 10250861–10250043
NGS from experimental infection
scf #1	1407	396 [28.0]	1011b	1–110 … 2560–2845	60.36	71.97	Beta chr4 23770925–23771936
scf #2	1315	332 [25.24]	983b	1–177 … 2560–2845	60.25	73.25	Beta chr8 1269745–1270665
scf #4	1336	458 [34.28]	878b	1–135 … 1184–1234 … 2570–2845	62.3	73.6	Beta chr6 57105781–57106674
scf #5	1552	715 [46.1]	837b	1–196 … 2327–2845	59.31	71.45	Beta chr8 33213612–33212757
scf #7	1393	621 [44.6]	772b	1–329 … 2554–2845	61.20	73.06	Beta chr6 470978–471718
scf#33	1241	763 [61.48]	478	1–108 … 2188–2845	56.49	73.44	Beta 0118.sca00382 22639–23116
scf#56/59	1429	453 [31.7]	976	1–102 … 2495–2845	59.83	68.04	Beta chr3 21716285–21716210

^aBCTIV-Siv (JX082259) coordinates

^bIncomplete and/or discontinuous matching