Table 3.
Comparison of DE-genes ranking based on endogenous expression in control and TGF-β1 samples. In the up-regulated genes, all genes from Rank 2 in control to Rank 5 in TGF-β1 and from Rank 1 to Rank 4 are listed.
| Gene ID | Symbol | Rank in control | Rank in TGF-β1 |
|---|---|---|---|
| NM_001004174 | AA467197 | 1 | 4 |
| NM_053080 | Aldh1a3 | 1 | 4 |
| NM_009865 | Cdh10 | 1 | 4 |
| NM_030209 | Crispld2 | 1 | 4 |
| NM_177914 | Dgkk | 1 | 4 |
| NM_008216 | Has2 | 1 | 4 |
| NM_053105 | Klhl1 | 1 | 4 |
| NM_027551 | Klhl30 | 1 | 4 |
| NM_001001985 | Nat8l | 1 | 4 |
| NM_175093 | Trib3 | 1 | 4 |
| NM_153543 | Aldh1l2 | 2 | 5 |
| NM_007735 | Col4a4 | 2 | 5 |
| NM_016919 | Col5a3 | 2 | 5 |
| NM_001081437 | Fbln2 | 2 | 5 |
| NM_023279 | Tubb3 | 2 | 5 |
| NM_139298 | Wnt9a | 2 | 5 |
| NM_007428 | Agt | 5 | 1 |
| NM_009778 | C3 | 5 | 1 |
| NM_016675 | Cldn2 | 5 | 1 |
| NM_011339 | Cxcl15 | 5 | 1 |
| NM_008597 | Mgp | 5 | 1 |
| NM_026864 | Rasl11a | 5 | 1 |
| NM_053116 | Wnt16 | 5 | 1 |
There are no genes from Rank 1 in control to Rank 5 in TGF-β1. In the down-regulated genes, all genes with changes from Rank 5 in control to Rank 1 TGF-β1 are listed.