Table 9.
Integrative analysis between H3K27me3 modification and DE-genes.
| Gene ID | Symbol | Gene expression fold change | H3K27me3 fold change |
|---|---|---|---|
| Positively correlated | |||
| NM_010074 | Dpp4 | -16.003 | -1.34722077 |
| NM_172463 | Sned1 | -6.257 | -1.16715932 |
| NM_008259 | Foxa1 | -5.241 | -1.82107269 |
| NM_175473 | Fras1 | -5.204 | -1.19562114 |
| NM_021331 | G6pc2 | -4.957 | -1.10028594 |
| NM_010501 | Ifit3 | -4.716 | -1.78884336 |
| NM_028894 | Lonrf3 | -4.574 | -1.54787003 |
| NM_001025570 | Prrx1 | -2.683 | -1.28457282 |
| NM_001163098 | Tchh | -1.47 | -1.43213155 |
| Negatively correlated | |||
| NM_031176 | Tnxb | -3.899 | 1.30043346 |
| NM_007467 | Aplp1 | 1.128 | -1.05803508 |
| NM_010118 | Egr2 | 1.409 | -1.99831957 |
| NM_025980 | Nrarp | 5.588 | -1.96283384 |
| NM_001008793 | Whrn | 12.943 | -2.75133723 |
| NM_021279 | Wnt1 | 13.997 | -1.10023151 |
The DE-gene with H3K27me3 modification are listed to show the gene expression is related to H3K27me3, including the gene expression with positive and negative correlation to H3K27me3. A scatter plot graph shows these genes based on gene expression level and methylation status fold (Figure 7).