Table 1.

24-SNP Barcodes for 65 Plasmodium falciparum isolates obtained from children with uncomplicated malaria in Enugu and Ibadan

(a) 28 samples from Enugu and (b) 37 samples from Ibadan that passed data quality tests. Genotyping nucleotide calls of A, T, C and G were given to samples with one peak matching the corresponding peak for the reference or alternate allele of the previously sequenced controls (3D7, Dd2, MCamp, TM90). Samples with peaks matching both the reference and alternate alleles were marked as mixed infections (N). Samples with peaks matching neither of the control peaks were marked as Negative (X). Assay 23 was omitted from the data, as it failed to provide data for any of the samples assayed