Table 2.

GO terms significantly enriched among the 10% genes with highest SNP abundance following Fisher's exact tests

GO ID	Term	p-value
Molecular function
GO: 0004521	Endoribonuclease activity	0.0029
GO: 0016787	Hydrolase activity	0.0096
GO: 0016229	Steroid dehydrogenase activity	0.0106
GO: 00016757	Transferase activity, transferring glycosyl groups	0.0120
GO: 0045330	Aspartyl esterase activity	0.0157
GO: 0015299	Solute: proton antiporter activity	0.0157
GO: 0015491	Cation: cation antiporter activity	0.0174
GO: 0005507	Copper ion binding	0.0229
GO: 0030599	Pectinesterase activity	0.0277
GO: 0016491	Oxidoreductase activity	0.0409
Biological process
GO: 0006066	Alcohol metabolic process	0.0026
GO: 0009625	Response to insect	0.0053
GO: 0006888	ER to Golgi vesicle-mediated transport	0.0081
GO: 0007049	Cell cycle	0.0190
GO: 0015804	Neutral amino acid transport	0.0217
GO: 0015980	Energy derivation by oxidation of organic compounds	0.0222
GO: 0010351	Lithium ion transport	0.0225
GO: 0006364	rRNA processing	0.0247
GO: 0010015	Root morphogenesis	0.0277
GO: 0009718	Anthocyanin-containing coumpound biosynthetic process	0.0294
GO: 0006820	Anion transport	0.0400
GO: 0009962	Regulation of flavonoid biosynthetic process	0.0409
GO: 0046189	Phenol-containing compound biosynthetic process	0.0411
GO: 0016458	Gene silencing	0.0422
GO: 0043269	Regulation of ion transport	0.0460
Cellular component
GO: 0009705	Plant-type vacuole membrane	0.00082
GO: 0005618	Cell wall	0.00495
GO: 0031225	Anchored component of membrane	0.00786
GO: 0009504	Cell plate	0.02325
GO: 0010319	stromule	0.04399