Official websites use .gov
A
.gov website belongs to an official
government organization in the United States.
Secure .gov websites use HTTPS
A lock (
) or https:// means you've safely
connected to the .gov website. Share sensitive
information only on official, secure websites.
Benchmarking Test Case
| 1. Input | 2. Similarity Metric | 3. Prioritization |
|---|---|---|
|
Tissue: Whole brain Brain regions Cell type-specific transcriptome Single cell transcriptome Genes: SNPs Differentially-expressed (top 50, 100 →500) Coexpression modules |
Correlation Enrichment (hypergeometric, Fischer’s, modified KS statistic) Pattern matching | Statistical methods Negative score vs absolute value of score Threshold (for example, −90 cut off) Median Combination of above |
