Table 1.
Overview of recovered transcriptome sequencing results from V. fischeri wild type (WT) and ∆hfq mutant exposed to low-shear-modeled microgravity (LSMMG) and gravity conditions
Time point (h) | Treatment | Strain | Total readsa per treatment (million)a | Average reads per library (million) | Mapped reads (% mapped) |
---|---|---|---|---|---|
12 | Gravity | WT | 11.18 | 3.73 | 96.31 |
12 | Gravity | ∆hfq | 7.20 | 3.60 | 96.20 |
12 | LSMMG | WT | 11.73 | 3.91 | 96.17 |
12 | LSMMG | ∆hfq | 11.25 | 3.75 | 96.08 |
24 | Gravity | WT | 13.03 | 4.34 | 95.86 |
24 | Gravity | ∆hfq | 8.40 | 4.20 | 96.49 |
24 | LSMMG | WT | 12.66 | 4.22 | 96.57 |
24 | LSMMG | ∆hfq | 14.04 | 4.68 | 97.10 |
aHigh-quality reads were filtered using Trimmomatic default parameters