Table 1.
Summary of D. mccartyi CRISPR-Cas system targets
| D. mccartyi strain | CRISPR type | Number of spacers that match specific types of mobile DNAa | Total number of spacers | ||||
|---|---|---|---|---|---|---|---|
| Prophage | IME1 | Other IME | rdhA IME | Unknown | |||
| KBDCA3 | I-C | 15 | 9 | 0 | 3 | 10 | 37 |
| 41% | 24% | 0% | 8% | 27% | |||
| DCMB5 | I-C | 17 | 5 | 2 | 1 | 29 | 54 |
| 31% | 9% | 4% | 2% | 54% | |||
| DCMB5 | I-E | 18 | 3 | 2 | 1 | 4 | 28 |
| 64% | 11% | 7% | 4% | 14% | |||
| CBDB1 | I-E | 11 | 3 | 0 | 0 | 5 | 19 |
| 58% | 16% | 0% | 0% | 26% | |||
| GT | I-E | 18 | 3 | 2 | 1 | 13 | 37 |
| 49% | 8% | 5% | 3% | 35% | |||
| KBVC1 | I-E | 12 | 6 | 1 | 1 | 21 | 41 |
| 29% | 15% | 2% | 2% | 51% | |||
IME integrative and mobilizable element
aIME1 refer to type 1 IMEs as defined in the text, rdhA IME are IMEs that contain an rdhA gene