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. 2018 Dec 19;13(12):e0207636. doi: 10.1371/journal.pone.0207636

Table 1. R packages used in inventory queries, analysis and visualization.

Each script generated using a package is listed.

Package Scripts in which package was used Citation
ridigbio aggregate-plots.R, collection-plots.R, identifying-collections.R, idigbio-data-source.R [5]
CartoDB cartoWrite.R [6]
RColorBrewer aggregate-plots.R [7]
countrycode aggregate-plots.R, collection-plots.R [8]
devtools cartoWrite.R [9]
dplyr aggregate-plots.R, collection-plots.R, identifying-collections.R, idigbio-data-source.R, preps.R, species.R [10]
httr aggregate-plots.R, collection-plots.R, identifying-collections.R, idigbio-data-source.R [11]
jsonlite aggregate-plots.R, collection-plots.R, counts.R, identifying-collections.R, idigbio-data-source.R, preps.R, species.R [12]
plotly aggregate-plots.R, counts.R, preps.R, species.R [13]
plotrix aggregate-plots.R, collection-plots.R [14]
plyr aggregate-plots.R, build-data-frame.R, collection-plots.R, counts.R,identifying-collections.R, idigbio-data-source.R, preps.R, species.R [15]
progress aggregate-plots.R, collection-plots.R, identifying-collections.R, idigbio-data-source.R [16]
reshape2 aggregate-plots.R, collection-plots.R, [17]
rworldmap aggregate-plots.R, collection-plots.R [18]
scales aggregate-plots.R, collection-plots.R [19]
tidyr counts.R, preps.R, species.R [20]