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. 2018 Aug 20;40(1):44–57. doi: 10.1093/jbcr/iry043

Table 1.

List of PCR primers for 16s ribosomal target regions and qRT–PCR

Gene name Primer sequence 5ʹ to 3ʹ
P. aeruginosa oprL – forward 5ʹ-ATGGAAATGCTGAAATTCGGC-3ʹ
P. aeruginosa oprL – reverse 5ʹ-CTTCTTCAGCTCGACGCGACG-3ʹ
P. aeruginosa oprL – probe (6FAM)-5ʹ-TGCGATCACCACCTTCTACTTCGAGT-3ʹ-MGBNFQ
Total 16S rDNA – forward 5ʹ-TCCTACGGGAGGCAGCAGT-3ʹ
Total 16S rDNA – reverse 5ʹ-GGACTACCAGGGTATCTAATCCTGTT-3ʹ
Total 16S rDNA – probe (6FAM)-5ʹ-CGTATTACCGCGGCTGCTGGCAC-3ʹ-MGBNFQ
FabD – forward 5ʹ-GGTCCAGAATGGTCCTGAAGAG-3ʹ
FabD – reverse 5ʹ-CGATCGAAACCGTAAGGATGGC-3ʹ
PvdS – forward 5ʹ-GATAACCGTACGATCCTGGTGAAG-3ʹ
Pvds – reverse 5ʹ-GACGATCTGGAACAGGTAGCTGAG-3ʹ
Alg8 – forward 5ʹ-CAAGGATTTCATCCTGCTTATCGG-3ʹ
Alg8 – reverse 5ʹ-GAAACTGGTGACCATCAGGAACA-3ʹ
AlgE – forward 5ʹ-GACAACCTCGACAAGACCTATACC-3ʹ
AlgE – reverse 5ʹ-CTCGAACGATAGTTGTAGGCATCG-3ʹ