Table 1.
Sequence characteristics of 39 sorghum GT47 genes.
| Gene symbol | Gene locus | CDS(bp) | Exons | Protein |
Transmembrane | ||
|---|---|---|---|---|---|---|---|
| Length(aa) | Mol. Wt (kD) | PI | |||||
| SbGT47_1 | Sobic.001G228900.1 | 1380 | 2 | 459 | 51.10 | 8.59 | 1 |
| SbGT47_2 | Sobic.001G229000.1 | 1842 | 1 | 613 | 67.55 | 6.54 | 0 |
| SbGT47_3 | Sobic.001G229100.1 | 1473 | 1 | 490 | 54.41 | 9.14 | 0 |
| SbGT47_4 | Sobic.001G303300.1 | 1353 | 1 | 450 | 50.49 | 8.28 | 0 |
| SbGT47_5 | Sobic.001G387300.1 | 1389 | 2 | 462 | 52.03 | 7.85 | 1 |
| SbGT47_6 | Sobic.001G486900.1 | 2352 | 14 | 783 | 88.59 | 6.83 | 1 |
| SbGT47_7 | Sobic.001G506300.1 | 1851 | 1 | 616 | 69.75 | 5.81 | 1 |
| SbGT47_8 | Sobic.001G506500.1 | 1641 | 1 | 514 | 58.39 | 8.10 | 1 |
| SbGT47_9 | Sobic.001G506600.1 | 1563 | 2 | 520 | 58.52 | 8.47 | 1 |
| SbGT47_10 | Sobic.001G506700.1 | 1539 | 2 | 512 | 57.02 | 9.96 | 1 |
| SbGT47_11 | Sobic.001G506800.1 | 1590 | 2 | 529 | 58.95 | 9.78 | 0 |
| SbGT47_12 | Sobic.001G506900.1 | 1542 | 2 | 513 | 57.14 | 8.52 | 0 |
| SbGT47_13 | Sobic.001G538700.1 | 1290 | 3 | 429 | 48.55 | 9.85 | 1 |
| SbGT47_14 | Sobic.001G541600.1 | 621 | 1 | 206 | 22.70 | 6.50 | 0 |
| SbGT47_15 | Sobic.002G062100.1 | 1755 | 3 | 584 | 63.59 | 8.80 | 1 |
| SbGT47_16 | Sobic.002G342300.1 | 1371 | 3 | 500 | 55.79 | 9.70 | 1 |
| SbGT47_17 | Sobic.003G102700.1 | 1716 | 8 | 566 | 63.92 | 9.31 | 1 |
| SbGT47_18 | Sobic.003G234701.1 | 1515 | 4 | 307 | 35.59 | 10.3 | 0 |
| SbGT47_19 | Sobic.003G331000.1 | 1500 | 8 | 499 | 56.27 | 9.07 | 1 |
| SbGT47_20 | Sobic.003G360300.1 | 1281 | 8 | 426 | 48.56 | 9.91 | 1 |
| SbGT47_21 | Sobic.003G405600.1 | 1299 | 4 | 437 | 48.78 | 9.44 | 1 |
| SbGT47_22 | Sobic.003G410600.1 | 1248 | 2 | 420 | 47.28 | 6.57 | 1 |
| SbGT47_23 | Sobic.003G410700.1 | 1254 | 4 | 417 | 46.90 | 6.90 | 0 |
| SbGT47_24 | Sobic.003G410800.1 | 1263 | 4 | 420 | 47.15 | 6.90 | 1 |
| SbGT47_25 | Sobic.004G070100.1 | 1212 | 5 | 408 | 46.29 | 9.25 | 1 |
| SbGT47_26 | Sobic.004G159100.1 | 1299 | 4 | 437 | 48.93 | 8.15 | 1 |
| SbGT47_27 | Sobic.004G213500.1 | 1413 | 3 | 475 | 53.08 | 9.65 | 1 |
| SbGT47_28 | Sobic.006G059000.1 | 1293 | 4 | 435 | 48.64 | 7.15 | 1 |
| SbGT47_29 | Sobic.006G186100.1 | 1707 | 2 | 573 | 63.03 | 8.47 | 1 |
| SbGT47_30 | Sobic.006G186200.1 | 1440 | 1 | 484 | 53.04 | 8.93 | 1 |
| SbGT47_31 | Sobic.006G260900.1 | 1371 | 3 | 461 | 52.27 | 9.19 | 1 |
| SbGT47_32 | Sobic.007G139300.1 | 1572 | 2 | 528 | 59.29 | 10.3 | 1 |
| SbGT47_33 | Sobic.008G021000.1 | 1488 | 2 | 500 | 55.13 | 8.98 | 1 |
| SbGT47_34 | Sobic.008G077900.1 | 1572 | 2 | 528 | 58.96 | 6.03 | 1 |
| SbGT47_35 | Sobic.008G138100.1 | 1761 | 1 | 591 | 65.75 | 9.25 | 1 |
| SbGT47_36 | Sobic.009G162700.1 | 1269 | 2 | 427 | 47.54 | 6.83 | 1 |
| SbGT47_37 | Sobic.009G220100.1 | 1248 | 1 | 420 | 46.81 | 6.83 | 1 |
| SbGT47_38 | Sobic.009G220200.1 | 1251 | 4 | 421 | 47.51 | 6.94 | 0 |
| SbGT47_39 | Sobic.010G059400.1 | 1530 | 4 | 551 | 61.69 | 9.84 | 0 |
Molecular Wt and PI of sorghum GT47 proteins have been calculated using DNAman software. Transmembrane domain is predicted by TMHMM Server v. 2.0.