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. 2018 Sep 12;132(21):2286–2297. doi: 10.1182/blood-2018-05-852277

Table 2.

Expression level of NF-κB target genes involved in ROS protection from RNAseq analysis of the spleen of Hbbth3/+ and Tfr2BMKO/Hbbth3/+ mice

Gene name Hbbth3/+ Tfr2BMKO/Hbbth3/+ P (DESeq2)* padj (IHW)
Sod2 (MnSOD) 41.02 ± 0.73 51.43 ± 3.26 .006551 .056003
Sod1 (CuZnSOD) 1205.18 ± 100.71 1617.59 ± 98.45 .005153 .045185
FtH1 5377.17 ± 414.93 6666.98 ± 593.60 .030397 .134317
Txn1 627.74 ± 18.86 735.73 ± 80.39 .054498 .195756
Txn2 74.12 ± 5.09 92.57 ± 3.54 .014006 .083579
GSTp1 124.66 ± 11.92 171.08 ± 17.92 .00604 .059385

Data are indicated as median of the TPM plus or minus standard error of the mean.

FtH1, ferritin heavy chain 1; GSTp1, glutathione S-transferase P1; IHW, independent hypothesis weighting; padj, adjusted P value; ROS, reactive oxygen species; Sod, superoxide dismutase; TPM, transcripts per kilobase million; Txn, thioredoxin.

*

The P value has been calculated using the DESeq2 algorithm.

The adjusted P value has been obtained using the IHW correction.