Table. Characteristics of 11 bat samples tested for Nipah virus, Bangladesh*.
Sample no. | Sample ID | Date sampled | Location | Sample type* | Taqman PCR Ct | NGS | Isolate designation |
---|---|---|---|---|---|---|---|
1 | PGB-1401B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.9 | Yes | NiV/BD/BA/2013/Raipur1401 |
2 | PGB-1402B | 2011 Apr 13 | Raipur, Manikganj | ORU | 30.1 | Yes | NiV/BD/BA/2013/Raipur1402 |
3 | PGB-1403B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.0 | Yes | NiV/BD/BA/2013/Raipur1403 |
4 | PGB-1404B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.3 | Yes | NiV/BD/BA/2013/Raipur1404 |
5 | PGB-1405B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.0 | Yes | NiV/BD/BA/2013/Raipur1405 |
6 | PGB-1406B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.9 | Yes | NiV/BD/BA/2013/Raipur1406 |
7 | PGB-1408B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.3 | Yes | NiV/BD/BA/2013/Raipur1408 |
8 | PGB-1409B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.7 | Yes | NiV/BD/BA/2013/Raipur1409 |
9 | PGB-1410B | 2011 Apr 13 | Raipur, Manikganj | ORU | 31.0 | Yes | NiV/BD/BA/2013/Raipur1410 |
10 | PGB-1411B | 2011 Apr 13 | Raipur, Manikganj | ORU | 30.8 | No | NiV/BD/BA/2013/Raipur1411 |
11 | PGB-191 | 2006 Jan 13 | Sylhet | RU | 39.0 | Yes | NiV/BD/BA/2013/Sylhet191 |
*Ct, cycle threshold; ID, identification; NGS, next-generation sequencing; NIV, Nipah virus; ORU, outbreak roost urine; RU, roost urine.