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. 2018 Dec 22;19:539. doi: 10.1186/s12859-018-2513-7

Table 2.

Ultrafine particle-exposure enriched pathways

Inflammation-related pathways CO % LI %
Antifolate resistance 14
Chemokine signaling 10
Cellular senescence 10
Fluid shear stress and atherosclerosis 15
Non-alcoholic fatty liver disease 10
Th17 cell differentiation 10
AGE-RAGE signaling (in diabetes) 15 18
IL-17 signaling 25 29
NF-kappa B signaling 14 19
NOD-like receptor signaling 15 22
Oxytocin signaling 17 20
Rheumatoid arthritis 14 19
TNF signaling 24 31
Cytokine-cytokine receptor interaction 14
Other immune-related pathways CO % LI %
B cell receptor signaling 15
Prolactin signaling pathway 9
T cell receptor signaling pathway 10
Th1 and Th2 cell differentiation 8
Cytosolic DNA-sensing 14 23
C-type lectin receptor signaling 17 25
Toll-like receptor signaling pathway 11 16
Leukocyte transendothelial migration 19
Oxidative stress-related pathways CO % LI %
FoxO signaling 12
HIF-1 signaling 16

The non-infection, non-cancer, immune-related KEGG pathways identified as enriched using Fisher’s exact test with Benjamini-Hochberg control (α=0.05). Columns CO % and LI % denote the proportion of genes identified for each pathway by CoNE and LIMMA approaches, respectively