Table 3.

CircRNAs identified in Jurkat and SH-SY5Y cell lines within MS-associated genes.

Chr	Start∗	End∗	CircRNA ID∗∗	Gene	Jurkat	SH-SY5Y
3	119219542	119222868	hsa_circ_0001329	TIMMDC1	×	×
3	119219542	119232566	hsa_circ_0006884	TIMMDC1	×
3	119219542	119236162	hsa_circ_0066874	TIMMDC1	×
4	103610731	103651893	hsa_circ_0001431	MANBA	×
4	103635595	103651893	hsa_circ_0142051	MANBA	×
4	106155054	106158508	hsa_circ_0070562	TET2	×	×
7	50358644	50367353	hsa_circ_0001708	IKZF1	×
7	50358644	50459561	novel	IKZF1	×
7	50444231	50459561	novel	IKZF1	×
16	11063018	11076848	hsa_circ_0004179	CLEC16A	×
16	11114050	11145498	hsa_circ_0002086	CLEC16A	×
16	11114050	11154879	hsa_circ_0000672	CLEC16A	×
16	11114050	11220003	hsa_circ_0007846	CLEC16A	×	×
17	57808782	57816308	hsa_circ_0006508	VMP1	×	×
17	57808782	57851246	hsa_circ_0005077	VMP1	×
22	22153301	22162135	hsa_circ_0004872	MAPK1	×
22	22160139	22162135	hsa_circ_0008870	MAPK1	×

^∗circRNA position is according to DCC output and referred to version hg19 of the genome. ^∗∗circRNA identifier is referred to circBase nomenclature.