(b) Association of haplotype frequencies with TB risk in TB cases vs. LTBI individuals

Haplotypes	Frequencies		Chi-square	OR (95% CI)	p value
	TB	LTBI
GAA	0.540	0.417	6.445	0.61 (0.42-0.90)	0.0111
GGG	0.228	0.313	4.184	0.65 (0.43-0.98)	0.0408
AGG	0.103	0.053	3.191	2.05 (0.91-4.62)	0.074
GGA	0.043	0.130	14.591	0.30 (0.16-0.57)	0.0001
AGA	0.045	0.021	1.564	2.16 (0.62-7.49)	0.211
AAA	0.035	0.018	0.993	1.95 (0.51-7.53)	0.3191
GAG	0.005	0.047	16.031	0.10 (0.02-0.40)	0.0001

OR: odds ratio; CI: confidence interval; ORs are adjusted for gender. The significant ORs are shown in italic.