Table 2.
Gene | Function | Expression in GSLCs | Reference | Number of putative DRE sites | Sense/position in bpa | Sequence in Homo sapiens (the core sequence is underlined) |
---|---|---|---|---|---|---|
MCUb | Mitochondrial calcium uniporter | Downregulated in the quiescent state | Aulestia et al., 2018 | 3 | S/-240 AS/-207 S/-101 | 5′ tttgggtgtcaattatgggt 3′ 5′ cccgtaattgactatgtccc 3′ 5′ caactcagtcaagggcttta 3′ |
MCUb | Mitochondrial calcium uniporter beta subunit | 2 | AS/-70 AS/-36 | 5′ ccaggcgctgacgaggagcc 3′ 5′ tgcgccgctgacgcctgcgg 3′ | ||
MICU1 | Mitochondrial calcium uptake 1 | NF | ||||
MICU2 | Mitochondrial calcium uptake 2 | 1 | AS/-199 | 5′ ggatgggatgacaggaagag 3′ | ||
VDAC1 | Voltage-dependent anion channel 1 | NF | ||||
TRPC3 | Transient receptor potential cation channel subfamily C member 3 | Upregulated by ING5 | Wang et al., 2018 | NF | ||
TRPC4 | Transient receptor potential cation channel subfamily C member 4 | 4 | AS/-620 AS/-582 S/-355 S/-76 | 5′ ggctggatgacggctggctg 3′ 5′ cactggctgacctcaagcag 3′ 5′ atccgctgtcagccgtggga 3′ 5′ ccgcgccgtcagtcctcgga 3′ | ||
TRPC5b | Transient receptor potential cation channel subfamily C member 5 | 4 | S/-478 S/-465 S/-451 AS/-421 | 5′ cctacagtgtcagctacccc 3′ 5′ ctacccctgtcagtttcccc 3′ 5′ ttccccgtgtcagtttcttc 3′ 5′ attgtgtgtgactggctgcg 3′ | ||
TRPM1 | Transient receptor potential cation channel subfamily M member 1 | 1 | S/-34 | 5′ ccgagggagtcagcagggtg 3′ | ||
aPosition upstream from the ATG; S, sense; AS, anti-sense; bputative DRE sites in close proximity. NF, not found, in accordance with the criteria in proximal 5′ upstream sequence between the tata box and the start codon (see details in text).