Table 1.
Example of UTRme summary report output.
Gene | utr_len | acceptor | score | occurrences | # sites |
---|---|---|---|---|---|
TcCLB.397937.5 | 15 | AG | 89 | 418 | 4 |
TcCLB.398343.9 | 80 | AG | 79 | 2 | 2 |
TcCLB.399033.19 | 21 | AG | 90 | 27 | 4 |
TcCLB.400945.10 | 100 | AG | 85 | 39 | 4 |
TcCLB.404001.10 | 14 | AG | 95 | 59 | 3 |
TcCLB.404001.4 | 11 | AG | 91 | 75 | 5 |
TcCLB.404843.20 | 143 | AG | 92 | 65 | 2 |
TcCLB.405165.19 | 41 | AG | 92 | 54 | 4 |
TcCLB.407477.20 | 10 | AG | 91 | 64 | 2 |
TcCLB.407477.30 | 63 | AG | 96 | 51 | 4 |
Summary report of best scoring epimastigote's SL sites using epimastigote RNA-seq data from Li et al. (2016). The first 10 lines are shown.