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. 2018 Nov 23;7(4):36. doi: 10.3390/ht7040036

Table 2.

Primers sequences. Each primer set* was designed to identify all the members of beta-lactamase gene family reported in the GenBank during the 2015 year.

Gene Family Primer Name Primer Sequence (5′ to 3′) Tm (°C) Position Amplicon (bp)
blaOXA BlaOXA-FW GGTTTCGGTAATGCTGAAATTGG 61.18 214–236 114
BlaOXA-RW GCTGTGTATGTGCTAATTGGGA 61.19 327–306
blaVIM BlaVIM-FW CGACAGTCARCGAAATTCC 61.39 105–123 133
BlaVIM-RW CAATGGTCTSATTGTCCGTG 61.34 238–219
blaSHV BlaSHV-FW1 CGTAGGCATGATAGAAATGGATC 61.04 133–155 106
BlaSHV-RW1 CGCAGAGCACTACTTTAAAGG 61.33 239–218
BlaSHV-FW2 GCCTCATTCAGTTCCGTTTC 61.62 399–418 141
BlaSHV-RW2 CCATTACCATGAGCGATAACAG 61.22 540–518
blaTEM BlaTEM-FW GCCAACTTACTTCTGACAACG 61.80 1699–1719 213
BlaTEM-RW CGTTTGGAATGGCTTCATTC 60.13 1912–1892
blaIMP BlaIMP-FW1 GGAATAGARTGGCTTAAYTCTCG 60.92 319–332 183
BlaIMP-RW1 CYASTASGTTATCTKGAGTGTG 62.45 502–480
BlaIMP-FW2 GGTGGAATAGARTGGCTTAAYTC 61.11 316–339 192
BlaIMP-RW2 CCAAACCACTACGTTATCTKGAG 61.29 508–485
blaROB BlaROB-FW CCAACATCGTGGAAAGTGTAG 61.27 718–739 126
BlaROB-RW GTAAATTGCGTACTCATGATTGC 60.90 844–821
blaKPC BlaKPC-FW GCTAAACTCGAACAGGACTTTG 61.79 100–121 117
BlaKPC-RW CTTGAATGAGCTGCACAGTG 61.90 216–197
blaCTX BlaCTX-FW1 GATACCGCAGATAATACGCAG 60.79 161–181 116
BlaCTX-RW1 CGTTTTGCGTTTCACTCTG 60.28 276–258
BlaCTX-FW2 GCTGATTCTGGTCACTTACTTC 61.02 789–810 83
BlaCTX-RW2 CGCCGACGCTAATACATC 60.69 855–872
BlaCTX-FW3 CTGCTTAACTACAATCCSATTGC 62.17 314–336 226
BlaCTX-RW3 GGAATGGCGGTATTKAGC 60.86 539–522
blaCMY BlaCMY-FW1 GTTTGAGCTAGGATCGGTTAG 60.25 337–357 123
BlaCMY-RW1 CTGTTTGCCTGTCAGTTCTG 61.48 460–441
BlaCMY-FW2 GAACGAAGGCTACGTAGCT 61.71 213–231 160
BlaCMY-RW2 CTGAAACGTGATTCGATCATCA 61.08 372–351
blaDHA BlaDHA-FW1 GCATATTGATCTGCATATCTCCAC 61.60 399–422 200
BlaDHA-RW1 GCTGCTGTAACTGTTCTGC 61.62 598–580
BlaDHA-FW2 GCGGATCTGCTGAATTTCTATC 61.54 464–485 147
BlaDHA-RW2 GCAGTCAGCAACTGCTCATAC 61.05 610–591
BlaDHA-FW3 GTAAGATTCCGCATCAAGCTG 61.74 430–450 117
BlaDHA-RW3 GGGTTATCTCACACCTTTATTACTG 61.08 546–522
blaP BlaP-FW GGAGAATATTGGGATTACAATGGC 61.74 271–294 204
BlaP-RW CGCATCATCGAGTGTGATTG 61.80 474–455
blaCFX BlaCFX-FW CCAGTCATATCATTGACAGTGAG 60.86 437–459 177
BlaCFX-RW GACATTTCCTCTTCCGTATAAGC 61.16 613–591
blaLAP BlaLAP-FW AGGGCTTGAACAACTTGAAC 61.07 249–268 126
BlaLAP-RW GTAATGGCAGCATTGCATAAC 60.59 374–354
blaBIL BlaBIL-FW GCCGATATCGTTAATCGCAC 61.65 100–119 128
BlaBIL-RW GTTATTGGCGATATCGGCTTTA 60.98 227–206

* All primers were designed in PerlPrimer v1.1.21 running under Debian 8 OS.