Tab.2.
List of thirty five up-regulated proteins after SNI
|
IPI accession
number |
Protein Name | Symbol | Coverage (%) | Total peptide | M.W. | Function summary | |
|---|---|---|---|---|---|---|---|
| Sorcerer |
Bioworks
(score) |
||||||
| IPI00623371 | Brevican* | Bcan | 4.19 | 6 | 3 (20.24) | 95995.5 | Cell growth |
| IPI00123465 | COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana) | Cops7a | 3.28 | 3 | 2 (20.26) | 30206.6 | Cell growth |
| IPI00270767 | Isoform 2 of Reticulon 4* | Rtn4 | 2.49 | 5 | 3 (30.18) | 126669.1 | Neurite growth inhibitor |
| IPI00121378 | Activated leukocyte cell adhesion molecule* | Alcam | 6.69 | 4 | 5 (30.17) | 65075.4 | Cell adhesion |
| IPI00129774 | Potassium voltage-gated channel, shaker-related subfamily, member 2 | Kcna2 | 5.81 | 2 | 4 (10.20) | 56684.5 | Channel |
| IPI00122101 | Solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | Slc6a9 | 3.46 | 4 | 3 (10.13) | 70916.2 | Neurotransmitter transporter |
| IPI00323911 | Glutathione S-transferase, α4* | Gsta4 | 11.30 | 3 | 3 (20.15) | 25547.2 | Metabolic enzyme |
| IPI00468688 | Threonyl-tRNA synthetase | Tars | 3.32 | 3 | 2 (20.18) | 83340.1 | Metabolic enzyme |
| IPI00406639 | Adenosine monophosphate deaminase 2 (isoform L) | Ampd2 | 3.89 | 2 | 2 (20.15) | 92007.7 | Metabolic enzyme |
| IPI00338536 | Succinate dehydrogenase complex, subunit B, iron sulfur (Ip) | Sdhb | 11.30 | 8 | 3 (20.16) | 31797 | Metabolic enzyme |
| IPI00330523 | Propionyl-Coenzyme A carboxylase, α polypeptide | Pcca | 3.32 | 2 | 4 (40.17) | 79903.9 | Metabolic enzyme |
| IPI00330302 | Acyl-CoA synthetase short-chain family member 2 | Acss2 | 3.98 | 2 | 2 (20.14) | 79002.3 | Metabolic enzyme |
| IPI00230754 | Solute carrier family 25, member 11 | Slc25a1 | 7.01 | 2 | 7 (40.21) | 34138.3 | Metabolic enzyme |
| IPI00131459 | Expressed in non-metastatic cells 1, protein | Nme1 | 12.5 | 3 | 2 (10.21) | 17190 | Metabolic enzyme |
| IPI00111981 | RIKEN cDNA 2810409H07 gene | 2810409H07Rik | 7.07 | 2 | 2 (10.18) | 44713.4 | Metabolic enzyme |
| IPI00330476 | Cytoplasmic FMR1 interacting protein 1 | Cyfip1 | 4.23 | 3 | 2 (20.17) | 145227.6 | Cytoskeleton |
| IPI00118120 | Myosin Va | Myo5a | 0.81 | 3 | 5 (30.19) | 215585 | Motor protein |
| IPI00114894 | Myosin heavy polypeptide 11, smooth muscle | Myh11 | 2.99 | 5 | 2 (20.15) | 227015.2 | Motor protein |
| IPI00114409 | Clathrin light polypeptide (Lca) | Clta | 7.66 | 3 | 4 (30.19) | 25539.1 | Signal transduction |
| IPI00116554 | Protein tyrosine phosphatase, non-receptor type 11 | Ptpn11 | 3.85 | 2 | 5 (30.14) | 68442.1 | Signal transduction |
| IPI00109212 | Sorting nexin 2 | Snx2 | 7.49 | 4 | 4 (20.21) | 58624.5 | Signal transduction |
| IPI00130045 | Phospholipase C, β1* | Plcb1 | 2.06 | 3 | 2 (10.22) | 138311.3 | Signal transduction |
| IPI00314844 | Protein tyrosine kinase 9 | Ptk9 | 8.0 | 2 | 2 (10.28) | 40062.6 | Signal transduction |
| IPI00115680 | Protein kinase C substrate 80K-H | Prkcsh | 4.42 | 2 | 2 (10.16) | 58774.8 | Signal transduction |
| IPI00120414 | DnaJ (Hsp40) homolog, subfamily A, member 3 | Dnaja3 | 7.46 | 2 | 2 (20.19) | 46829.7 | Apoptosis signal transduction |
| IPI00408957 | SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) | Sugt1 | 11.9 | 4 | 2 (10.22) | 38141.9 | Proteolysis/Ubiquitination |
| IPI00127172 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 | Ddx1 | 3.24 | 3 | 4 (30.15) | 82483.1 | RNA processing |
| IPI00308851 | Phosphatidylinositol-specific phospholipase C, X domain containing 3 | Plcxd3 | 10.30 | 2 | 2 (10.24) | 36296.3 | Unknown |
| IPI00605677 | Dmx-like 2 | Dmxl2 | 1.18 | 3 | 5 (40.21) | 322567.7 | Unknown |
| IPI00125154 | Protein tyrosine phosphatase, receptor type Z, polypeptide 1 | Ptprz1 | 3.54 | 9 | 6 (40.19) | 175175 | Unknown |
| IPI00124979 | RNA binding motif protein, X chromosome | Rbmx | 6.14 | 4 | 2 (10.24) | 42284.7 | Unknown |
| IPI00339468 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 | Dhx9 | 2.60 | 3 | 3 (20.19) | 149604.3 | Unknown |
| IPI00403618 | RIKEN cDNA 6330407J23 gene | 6330407J23Rik | 2.43 | 2 | 8 (50.18) | 103464.3 | Unknown |
| IPI00111166 | Haloacid dehalogenase-like hydrolase domain containing 2 | Hdhd2 | 11.20 | 4 | 4 (20.28) | 28713.1 | Unknown |
| IPI00135686 | Peptidylprolyl isomerase B | Ppib | 12 | 2 | 2 (10.15) | 23695.8 | Unknown |
*Bolds are discussed.