(A) Profiles of fumarate, malate, aspartate and succinate as detected by LC-MS metabolomics. Samples and visualization as in Fig 4B. (B) Proportion of these metabolites with two 13C labelled carbons in WT and THT1/THT2 RNAi cells, * p < 0.001. (C) Proportion of these metabolites with three 13C labelled carbons in WT and THT1/THT2 RNAi cells, * p < 0.001. (D) Scheme indicating potential explanation for the labelling patterns observed. The 13C2 part may be produced by the TCA cycle activity fed by 13C2 labelled acetyl-CoA, advantageous for additional ATP production. The 13C3 part could be produced in the glycosomal succinate shunt, which is activated in order to maintain the NAD+/NADH balance inside the organelle.