Skip to main content
. 2018 Dec 28;13(12):e0209685. doi: 10.1371/journal.pone.0209685

Table 1. Nucleotide sequences of polymerase chain reaction primers and conditions for amplification of Anaplasma and Candidatus Neoehrlichia species genes.

Species and target genes PCR primer sequence (5’-3’) Annealing (°C/min) PCR product
size (bp)
References
Anaplasma and Ehrlichia spp. groEL
(external primer)
GROEL -607F
(5′-GAAGATGCWGTWGGWTGTACKGC-3′)
GROEL 1294R
(5′-AGMGCTTCWCCTTCWACRTCYTC-3′)
57 688 30
Anaplasma and Ehrlichia spp. groEL
(internal primer)
GROEL- 667F
(5′-ATTACTCAGAGTGCTTCTCARTG-3′)
GROEL -1121R
(5′-TGCATACCRTCAGTYTTTTCAAC-3′)
57 445 30
Ca. Neoehrlichia
16S rRNA
(external primer)
16S-EC9-F
(5′-TACCTTGTTACGACTT-3′)
16S-EC12A-R
(5′-TGATCCTGGCTCAGAACGAACG-3′)
41 1,462 5
Ca. Neoehrlichia
16S rRNA
(internal primer)
16S-IS58-62f
(5′-GGAATAGCTGTTAGAAATGACA-3′)
16S-IS58-594r
(5′-CTATCCTCTCTCGATCTCTAGTTT-3′)
54 488 5
A. phagocytophilum
16S rRNA
(external primer)
AE1-F
(5′-AAGCTTAACACATGCAAGTCGAA-3′)
AE1-R
(5′-AGTCACTGA CCCAACCTTAAATG-3′)
56 1,406 30
A. phagocytophilum
16S rRNA
(internal primer)
AP-F
(5′-GTCGAACGGATTATTCTTTATAGCTTGC-3′)
AP-R
(5′-CCCTTCCGTTAAGAAGGATCTAATCTCC-3′)
56 926 30