Table 1.
Effect of acid treatments on the conformational states of EV-D68 strain MO
Dataset | A_Acid_1 | A_Acid_2 | A_Acid_3 | A_Acid_4 |
Temperature | 4 °C | RT* | RT* | RT* |
Duration† | 3 min | 3 min | 30 s | 3 min |
pH | 6.5 | 6.5 | 6.0 | 6.0 |
No. of full particles | 32,972 | 68,112 | 100,113 | 19,798 |
No. of empty particles | 891 | 2,389 | 4,687 | 184 |
Percentage of full particles | 97.4 | 96.6 | 95.5 | 99.1 |
Percentage of full native virions‡ | 76.6 ± 0.4 | 40.2 ± 0.2 | 37.4 ± 0.4 | 3.5 ± 0.1 |
Percentage of A particles‡ | 7.3 ± 0.2 | 56.4 ± 0.2 | 58.1 ± 0.4 | 95.6 ± 0.1 |
Percentage of E1 particles‡ | 13.5 ± 0.5 | —§ | —§ | —§ |
Room temperature.
Approximate time from the initiation of acid treatment to the state of being quenched by freezing.
Percentage among all particles. Data are presented as mean ± SD; 3D classifications were performed six times.
Not identified.