Table 2.
Reference transcriptome | |
---|---|
Total assembled transcripts | 67,429 |
ExN50a | 1653 bp |
Shorter assembled transcript length (transcript) | 148 bp (Pp11025) |
Longer assembled transcript length (transcript) | 12,752 bp (Pp28188) |
Mean length | 999 bp |
Median length | 627 bp |
Transcripts without N’s bases | 65,852 |
Mean gap percentage per transcript length | 0.2% |
Predicted coding transcripts | 58,527 |
Predicted non-coding transcripts | 8896 |
aExN50 = transcript length metric that considers the top most highly expressed transcripts and means that at least 50% of the assembled transcript nucleotides were found in transcripts that were at least this length