Table 2.
Computed and Experimental Absolute Binding Free Energies (kcal/mol) for Benzene Using Different Algorithms.
| backbone DOF | ΔGbind | |
|---|---|---|
| MD | N,Cα,C constrained | −9.93±0.15a |
| MD | Cα constrained | −9.45 ± 0.33a |
| MD | free | −5.85 ± 0.19 |
| MC | rigid | −9.97 ± 0.42 |
| MC | CRA | −6.82 ± 0.20 |
| MC | CRA+pivot | −6.44 ± 0.22 |
| Experimental | −5.19 ± 0.16 |
Uncertainty calculated from a single simulation.